wsabi

Precision Locus Targeting

Configuration

1. Target Locus Source

Chr:Pos

2. Variant Data

Supported: VCF, TSV, JSON

3. Filters

Sequence Padding (bp)

Results

Waiting for input...

Upload a file and define a target to see results.

Configuration

Target Locus

Chr:Pos

Methylation Data

No data loaded

Sequence Padding (bp)

Results

Waiting for input...

Upload data and run analysis

Action Completed

Ready

Download Reference Data

Access our curated collection of SNP datasets, reference genomes, and annotation files.

📂

SNPFinder Data Repository

Hosted on SharePoint

Access Repository ↗

🌐 Free Access & Open Data

All datasets available through wsabi are publicly accessible and free to use. We are committed to providing researchers with open access to genomic data.

v3.1 Current

🎉 Methylation Analysis Support

Methylation Analysis Tab - Complete tabbed interface for SNP and Methylation workflows
Genome-wide methylation data - Full support for KOLF2.1J PacBio long-read methylation datasets (.tsv.gz)
All 4 locus modes available - Coordinates, gRNA Cut Site, Gene Name, Gene + gRNA Sequence
Enhanced methylation display - Probability visualization, methylated base (C/G) with strand (+/-)
Clinical annotations - ClinVar integration and MAF data for methylation sites
Side-by-side layout - Configuration and results panels displayed horizontally
Smart file parsing - Automatic gzip decompression with pako library
Bug fixes - Fixed .tsv.gz parsing freeze, chromosome format normalization, API integration

📊 Supported Datasets

WTC-11 SNP datasets - Comprehensive SNP variant data from WTC-11 cell line
KOLF2.1J Methylation - PacBio long-read methylation genome-wide data
VCF/TSV/JSON formats supported

v3.0

Initial SNP analysis release
VCF/TSV/JSON file support
Gene lookup and gRNA sequence mapping
Clinical significance and MAF integration
Genomic context visualization

Configuration

Results

Configuration

Results

Info & Datasets

Download Reference Data

SNPFinder Data Repository

🎉 Methylation Analysis Support

📊 Supported Datasets